Degree Type

Honors Capstone Project

Date of Submission

Spring 5-1-2019

Capstone Advisor

Carlos Castañeda

Honors Reader

Surabhi Raina

Capstone Major

Biology

Capstone College

Arts and Science

Audio/Visual Component

no

Capstone Prize Winner

no

Won Capstone Funding

no

Honors Categories

Sciences and Engineering

Subject Categories

Biology | Biotechnology | Life Sciences

Abstract

Liquid-liquid phase separation (LLPS), the mechanism by which macromolecules demix to form a dense liquid- like phase in equilibrium with a phase dilute of molecules, is hypothesized to be the dominant mechanism governing membraneless organelle formation inside the cell. Stress granules, a type of membraneless organelle that assemble reversibly in response to cellular stress, may be formed through LLPS. Dysregulation of this process may lead to disease aggregates in vivo. LLPS is thought to be governed by the occurrence of weak, multivalent interactions between molecules such as proteins and RNA molecules. Multivalent interactions, the proposed driving force governing LLPS, are weak, dynamic forces between multiple sites on different proteins, giving rise to liquid-like properties. Here, we use human UBQLN2 as a model system for studying molecular drivers of LLPS in vitro. UBQLN2 contains a domain that binds to ubiquitin, which marks proteins for degradation by the proteasome. Here, we show that ubiquitin interactions with UBQLN2 are altered by UBQLN2 amino acid substitutions.

Creative Commons License

Creative Commons Attribution 4.0 International License
This work is licensed under a Creative Commons Attribution 4.0 International License.

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